Centre for Computational Biology

Centre for Computational Biology

The Centre for Computational Biology will analyse and interpret the massive amounts of data generated by all other centres, build predictive models, and help to further our understanding of biological processes and their impact on human health and response to therapies. It will integrate with research pursued by the Centre for Genomics, taking computational and bioinformatics approaches to study disease-associated biological processes. It will also be active in developing new methods of image analysis that have relevance in many areas of biomedicine.

Computational Biology Publications

Publications

Identification of Intrinsic Drug Resistance and Its Biomarkers in High-Throughput Pharmacogenomic and CRISPR Screens

Iñigo Ayestaran, Ana Galhoz, Elmar Spiegel, Ben Sidders, Jonathan R. Dry, Frank Dondelinger, Andreas Bender, Ultan McDermott, Francesco Iorio, Michael P. Menden

2020 - Patterns

LINK


CELLector: Genomics-Guided Selection of Cancer In Vitro Models

Hanna Najgebauer, Mi Yang, Hayley E. Francies, Clare Pacini, Euan A. Stronach, Mathew J. Garnett, Julio Saez-Rodriguez, Francesco Iorio

2020 - Cell Systems

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Agreement between two large pan-cancer CRISPR-Cas9 gene dependency data sets

Joshua M. Dempster, Clare Pacini, Sasha Pantel Fiona M. Behan, Thomas Green, John Krill-Burger, Charlotte M. Beaver, Scott T. Younger, Victor Zhivich, Hanna Najgebauer, Felicity Allen, Emanuel Gonçalves, Rebecca Shepherd, John G. Doench, Kosuke Yusa, Francisca Vazquez, Leopold Parts, Jesse S. Boehm, Todd R. Golub, William C. Hahn, David E. Root, Mathew J. Garnett, Aviad Tsherniak, Francesco Iorio

2019 - Nature Communications

LINK